STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005576Peptide hydrolase; Belongs to the peptidase M28 family. (392 aa)    
Predicted Functional Partners:
BK809_0005352
3'(2'),5'-bisphosphate nucleotidase.
 
      0.832
BK809_0004367
UBA domain-containing protein 7.
    
 0.568
BK809_0004781
E3 ubiquitin-protein ligase.
    
  0.545
BK809_0007433
Polarized growth protein rax2.
    
  0.545
BK809_0002452
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.495
BK809_0003118
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
  0.494
BK809_0002534
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.491
BK809_0007772
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.491
BK809_0002855
Rad60-SLD_2 domain-containing protein.
    
 0.491
BK809_0004569
6-hydroxy-D-nicotine oxidase; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
  
 0.484
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.