STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005638Aminotran_1_2 domain-containing protein. (490 aa)    
Predicted Functional Partners:
BK809_0004183
Tryptophan synthase.
   
 
 0.956
BK809_0007959
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
   
 
 0.947
BK809_0005995
Aspartokinase.
   
 
 0.707
BK809_0006148
Putative prephenate dehydrogenase [NADP(+)].
    
 0.699
BK809_0006326
Homoserine dehydrogenase.
   
 0.691
BK809_0002322
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.688
BK809_0004808
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.688
BK809_0004095
Aspartate aminotransferase.
  
 0.688
BK809_0003565
Chorismate mutase.
    
 0.684
BK809_0000550
Kynurenine 3-monooxygenase.
   
 
 0.674
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.