STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005721Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (551 aa)    
Predicted Functional Partners:
BK809_0003060
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.829
BK809_0006405
Nitrate reductase [NADH] 1.
    
 0.800
BK809_0006514
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.800
BK809_0002494
U3 small nucleolar RNA-associated protein 20.
   
  0.753
BK809_0001793
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.717
BK809_0002231
Ribosomal RNA small subunit methyltransferase NEP1.
   
  0.716
BK809_0002375
Putative rrna-processing protein fcf1.
    
  0.714
BK809_0005708
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.714
BK809_0007155
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.714
BK809_0004059
Putative small nucleolar ribonucleoprotein complex subunit.
   
  0.714
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.