STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_000594325-hydroxycholesterol 7-alpha-hydroxylase. (496 aa)    
Predicted Functional Partners:
BK809_0004285
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.813
BK809_0006971
Methylsterol monooxygenase; Belongs to the sterol desaturase family.
   
 0.778
BK809_0001618
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.778
BK809_0006405
Nitrate reductase [NADH] 1.
   
 0.777
BK809_0006514
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.777
BK809_0004011
Mitochondrial escape protein 2.
 
  
   0.765
BK809_0004888
Squalene monooxygenase.
   
 0.718
BK809_0005813
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.681
BK809_0005752
Ergosterol biosynthetic protein 28.
   
 
 0.666
BK809_0003626
3-keto-steroid reductase.
   
 0.659
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.