STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0005986Replication factor C subunit 3. (399 aa)    
Predicted Functional Partners:
BK809_0007613
Putative activator 1 41 kDa subunit.
  
0.999
BK809_0004123
Replication factor C subunit 5.
   
0.999
BK809_0004388
Replication factor C subunit 4.
  
0.998
BK809_0004192
Replication factor C subunit 1.
   
0.997
BK809_0007740
Cell cycle checkpoint protein RAD17.
   
 0.997
BK809_0004486
ATPase family AAA domain-containing protein 5.
   
 0.981
BK809_0006540
Chromosome transmission fidelity protein 18.
   
 0.979
BK809_0001377
N-acetyltransferase eso1.
  
 0.976
BK809_0002151
Uncharacterized protein.
  
 0.976
BK809_0004252
Werner syndrome ATP-dependent helicase.
   
 0.974
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.