STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006048APH domain-containing protein. (304 aa)    
Predicted Functional Partners:
BK809_0003100
Cross-pathway control protein 1.
    
 0.881
BK809_0005353
54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.
    
  0.798
BK809_0002953
Putative mitochondrial 37s ribosomal protein rsm19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.782
BK809_0003629
37S ribosomal protein S7, mitochondrial.
   
 
 0.756
BK809_0003528
37S ribosomal protein S12, mitochondrial.
   
 
 0.754
BK809_0004743
37S ribosomal protein S25, mitochondrial.
   
 
 0.748
BK809_0003185
Uncharacterized protein.
   
 
 0.742
BK809_0003490
54S ribosomal protein L27, mitochondrial.
   
 
 0.740
BK809_0002949
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.738
BK809_0001005
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.732
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
Server load: low (20%) [HD]