STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006063Chitin deacetylase 1. (277 aa)    
Predicted Functional Partners:
BK809_0004762
Uncharacterized protein.
    
 0.597
BK809_0003562
Coiled-coil domain-containing protein 25.
    
 0.597
BK809_0005911
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.563
BK809_0001888
L-asparaginase 2-4; Belongs to the asparaginase 1 family.
 
      0.562
BK809_0001776
Putative exocyst complex component sec6.
    
 0.528
BK809_0001563
F-box protein pof6.
     
 0.515
BK809_0007429
Exocyst complex component SEC10.
     
 0.515
BK809_0003196
Putative adp-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 
  0.469
BK809_0003039
Uncharacterized protein.
   
 
  0.469
BK809_0006129
GTP-binding protein ypt2.
     
 0.451
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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