Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LCGL_0031Dihydrolipoamide dehydrogenase E1 subunit beta subunit. (326 aa)    
Predicted Functional Partners:
LCGL_0030
Dihydrolipoamide dehydrogenase E2 subunit.
 
 0.999
LCGL_0032
Dihydrolipoamide dehydrogenase E1 subunit alpha subunit.
 0.999
LCGL_0029
Dihydrolipoamide dehydrogenase E3 subunit.
 
 0.998
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.980
LCGL_0355
Formate acetyltransferase.
   
 
 0.950
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.949
LCGL_0416
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.949
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.949
LCGL_1055
Pyridine mercuric reductase.
 
 0.934
LCGL_0033
Lipoate-protein ligase.
 
  
 0.924
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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