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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0110dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC. (198 aa)    
Predicted Functional Partners:
LCGL_0112
dTDP-D-glucose 4,6-dehydratase RmlB; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.999
LCGL_0113
dTDP-4-dehydrorhamnose reductase RmlD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
LCGL_0169
dTDP-L-rhamnose synthase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 0.999
LCGL_0109
Glucose-1-phosphate thymidylyltransferase RmlA; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.998
LCGL_0444
UDP-glucose 6-dehydrogenase.
  
  
 0.965
LCGL_0129
UDP-galactopyranose mutase.
  
  
 0.961
LCGL_0437
Sugar transferase EpsD.
  
  
 0.863
LCGL_0115
Rhamnosyltransferase.
 
  
 0.801
LCGL_0111
Conserved hypothetical protein.
       0.780
LCGL_0394
Glycosyltransferase.
  
  
 0.750
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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