Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0143Zinc ABC transporter substrate-binding subunit; Belongs to the bacterial solute-binding protein 9 family. (281 aa)    
Predicted Functional Partners:
LCGL_0180
Zinc ABC transporter ATP-binding subunit.
 
 
 0.998
LCGL_0179
Zinc ABC transporter permease subunit.
 
 
 0.993
LCGL_0181
Zinc transport transcription regulator.
  
  
 0.969
LCGL_1531
Manganese ABC transporter ATP-binding component.
 
  
 0.906
LCGL_1532
Manganese ABC transporter permease component.
 
  
 0.903
rpsZ
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.741
LCGL_0524
Two-component system sensor kinase.
   
  
 0.669
LCGL_0523
Two-component system regulator protein.
      
 0.662
LCGL_1330
Fibronectin-binding protein.
      
 0.588
LCGL_0142
Hypothetical protein.
       0.586
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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