Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_0145Penicillin-binding protein 2a. (762 aa)    
Predicted Functional Partners:
LCGL_0611
Penicillin-binding protein 2X.
 
 
 0.990
LCGL_0208
Penicillin-binding protein 2B.
 
 0.985
LCGL_1963
Penicillin-binding protein 3; Belongs to the peptidase S11 family.
  
 
 0.943
LCGL_0297
Penicillin-binding protein 1A/1B.
  
  
 
0.929
LCGL_0257
Penicillin-binding protein 1B.
  
  
0.928
LCGL_0332
Penicillin-binding protein 1A.
  
  
 
0.928
LCGL_0359
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.915
LCGL_0418
D-alanyl-D-alanine carboxypeptidase.
     
 0.913
LCGL_0556
Cell division initiation protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.897
LCGL_1373
Cell division protein; Belongs to the SEDS family.
 
 
 
 0.884
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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