Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LCGL_0191Alanine dehydrogenase; Belongs to the AlaDH/PNT family. (373 aa)    
Predicted Functional Partners:
LCGL_0793
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
  
  
 
0.911
LCGL_1833
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
  
  
 
0.910
LCGL_0580
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.907
LCGL_1302
L-aspartate-beta-decarboxylase.
     
 0.901
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
    
 0.868
LCGL_0982
Pyruvate phosphate dikinase.
     
 0.810
LCGL_1336
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.810
LCGL_0962
Pyruvate oxidase; Belongs to the TPP enzyme family.
     
 0.806
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.803
LCGL_0416
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.803
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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