Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LCGL_0218Oligopeptide ABC trasporter permease subunit. (344 aa)    
Predicted Functional Partners:
LCGL_0217
Oligopeptide ABC trasporter permease subunit.
 0.999
LCGL_0219
Oligopeptide ABC trasporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
 0.999
LCGL_0220
Oligopeptide ABC trasporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
 0.999
LCGL_0216
Oligopeptide ABC transporter substrate-binding subunit.
 
 
 0.996
LCGL_0221
Conserved hypothetical protein.
       0.447
metN
ABC transporter ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 0.412
LCGL_1732
ABC transporter permease component.
      
 0.405
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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