LCGL_0223 protein (Lactococcus garvieae) - STRING interaction network

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Score

LCGL_0223

Conserved hypothetical protein. (823 aa)

Predicted Functional Partners:

LCGL_0224

0.773

prfC

0.530

LCGL_0115

0.461

LCGL_0120

0.444

cshA

0.438

LCGL_1649

0.433

Your Current Organism:

Lactococcus garvieae

NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LCGL_0115	LCGL_0120	LCGL_0115	LCGL_0120	Rhamnosyltransferase.	Rhamnosyltransferase.	0.884
LCGL_0115	LCGL_0223	LCGL_0115	LCGL_0223	Rhamnosyltransferase.	Conserved hypothetical protein.	0.461
LCGL_0120	LCGL_0115	LCGL_0120	LCGL_0115	Rhamnosyltransferase.	Rhamnosyltransferase.	0.884
LCGL_0120	LCGL_0223	LCGL_0120	LCGL_0223	Rhamnosyltransferase.	Conserved hypothetical protein.	0.444
LCGL_0223	LCGL_0115	LCGL_0223	LCGL_0115	Conserved hypothetical protein.	Rhamnosyltransferase.	0.461
LCGL_0223	LCGL_0120	LCGL_0223	LCGL_0120	Conserved hypothetical protein.	Rhamnosyltransferase.	0.444
LCGL_0223	LCGL_0224	LCGL_0223	LCGL_0224	Conserved hypothetical protein.	Hypothetical protein.	0.773
LCGL_0223	LCGL_1649	LCGL_0223	LCGL_1649	Conserved hypothetical protein.	Phosphatase.	0.433
LCGL_0223	cshA	LCGL_0223	LCGL_0225	Conserved hypothetical protein.	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	0.438
LCGL_0223	prfC	LCGL_0223	LCGL_0222	Conserved hypothetical protein.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.530
LCGL_0224	LCGL_0223	LCGL_0224	LCGL_0223	Hypothetical protein.	Conserved hypothetical protein.	0.773
LCGL_0224	cshA	LCGL_0224	LCGL_0225	Hypothetical protein.	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	0.433
LCGL_0224	prfC	LCGL_0224	LCGL_0222	Hypothetical protein.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.516
LCGL_1649	LCGL_0223	LCGL_1649	LCGL_0223	Phosphatase.	Conserved hypothetical protein.	0.433
cshA	LCGL_0223	LCGL_0225	LCGL_0223	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	Conserved hypothetical protein.	0.438
cshA	LCGL_0224	LCGL_0225	LCGL_0224	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	Hypothetical protein.	0.433
cshA	prfC	LCGL_0225	LCGL_0222	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.405
prfC	LCGL_0223	LCGL_0222	LCGL_0223	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Conserved hypothetical protein.	0.530
prfC	LCGL_0224	LCGL_0222	LCGL_0224	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Hypothetical protein.	0.516
prfC	cshA	LCGL_0222	LCGL_0225	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	ATP-dependent RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.	0.405