Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_0330N-acetylmuramidase. (310 aa)    
Predicted Functional Partners:
LCGL_0329
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.549
LCGL_1120
Phage minor tail protein.
 
 
   0.515
LCGL_1116
Hypothetical phage protein.
   
 
 0.473
LCGL_1370
Conserved hypothetical protein.
  
  
 0.453
LCGL_1371
Conserved hypothetical protein.
  
  
 0.453
LCGL_1929
Conserved hypothetical protein.
  
  
 0.453
LCGL_1930
Conserved hypothetical protein.
  
  
 0.453
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
   
 0.436
LCGL_1693
Conserved hypothetical protein.
     
 0.401
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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