Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0376Pyruvate-formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (264 aa)    
Predicted Functional Partners:
LCGL_0355
Formate acetyltransferase.
  
 0.972
LCGL_1883
Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.945
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
     
 0.862
LCGL_0031
Dihydrolipoamide dehydrogenase E1 subunit beta subunit.
   
  
 0.681
LCGL_0377
Inorganic pyrophosphatase.
       0.638
LCGL_0378
Conserved hypothetical protein.
       0.623
LCGL_0032
Dihydrolipoamide dehydrogenase E1 subunit alpha subunit.
   
  
 0.591
LCGL_0375
Multidrug transporter protein; Belongs to the major facilitator superfamily.
       0.578
LCGL_1312
Sortase.
      
 0.540
LCGL_0030
Dihydrolipoamide dehydrogenase E2 subunit.
   
  
 0.535
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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