Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_0401Cation transporter. (391 aa)    
Predicted Functional Partners:
LCGL_0402
Competence protein ComEA.
  
    0.605
LCGL_0404
Competence protein ComEC.
       0.572
LCGL_0403
Truncated competence protein ComEC.
       0.553
LCGL_0400
ABC transporter ATP-binding component.
     
 0.470
LCGL_1223
Conserved hypothetical protein.
 
   
 0.468
LCGL_1702
Conserved hypothetical protein.
  
  
 0.463
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
     
 0.448
LCGL_0405
Esterase.
 
     0.440
LCGL_1460
Sulfate transporter protein.
  
 
 0.426
LCGL_1118
Hypothetical phage protein.
  
     0.420
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.