Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0597Putative hemolysin. (269 aa)    
Predicted Functional Partners:
LCGL_0596
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
    0.930
LCGL_0599
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
  
 0.874
argR
Transcription regulator; Regulates arginine biosynthesis genes.
  
    0.871
LCGL_0323
Putative hemolysin.
     
 0.766
LCGL_0600
Conserved hypothetical protein.
       0.751
nadK
Conserved hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
 0.608
LCGL_0601
Alanine-adding enzyme MurN.
       0.580
LCGL_0602
Alanine-adding enzyme MurN.
       0.580
LCGL_0525
1-deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
    0.573
LCGL_0374
Putative hemolysin.
     
 0.560
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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