Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0601Alanine-adding enzyme MurN. (405 aa)    
Predicted Functional Partners:
LCGL_0602
Alanine-adding enzyme MurN.
 
  
 
0.978
LCGL_0608
Serine/alanine-adding enzyme MurM.
 
  
0.964
murD
UDP-N-acetylmuramoylalanine D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
    
 0.668
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
    
 0.647
LCGL_0599
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
    0.625
LCGL_0600
Conserved hypothetical protein.
       0.596
LCGL_0596
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.580
LCGL_0597
Putative hemolysin.
       0.580
argR
Transcription regulator; Regulates arginine biosynthesis genes.
       0.580
LCGL_0679
Truncated immunogenic secreted protein.
  
   
 0.548
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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