Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0715NADH dehydrogenase. (660 aa)    
Predicted Functional Partners:
LCGL_0716
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
  
 0.883
LCGL_1354
Conserved hypothetical protein.
 
     0.841
LCGL_1353
Conserved hypothetical protein.
 
    0.817
LCGL_1355
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
  
 0.817
LCGL_0820
Prenyltransferase.
 
  
 0.801
LCGL_0096
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.797
LCGL_0097
Prenyltransferase.
 
  
 0.784
LCGL_1313
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.713
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.681
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.607
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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