LCGL_0799 protein (Lactococcus garvieae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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[Homology]

Score

LCGL_0799

Competence protein ComFA. (418 aa)

Predicted Functional Partners:

LCGL_0798

0.976

LCGL_0136

0.963

LCGL_0402

0.865

LCGL_0137

0.823

LCGL_0265

0.792

LCGL_0404

0.790

LCGL_1900

0.790

LCGL_1069

0.772

LCGL_0800

0.728

LCGL_1298

0.714

Your Current Organism:

Lactococcus garvieae

NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
LCGL_0136	LCGL_0137	Competence protein.	Competence protein.	0.999
LCGL_0136	LCGL_0265	Competence protein.	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.686
LCGL_0136	LCGL_0402	Competence protein.	Competence protein ComEA.	0.872
LCGL_0136	LCGL_0404	Competence protein.	Competence protein ComEC.	0.853
LCGL_0136	LCGL_0798	Competence protein.	Competence protein ComFC.	0.544
LCGL_0136	LCGL_0799	Competence protein.	Competence protein ComFA.	0.963
LCGL_0136	LCGL_1069	Competence protein.	DNA processing protein.	0.782
LCGL_0136	LCGL_1900	Competence protein.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.714
LCGL_0137	LCGL_0136	Competence protein.	Competence protein.	0.999
LCGL_0137	LCGL_0265	Competence protein.	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.531
LCGL_0137	LCGL_0402	Competence protein.	Competence protein ComEA.	0.827
LCGL_0137	LCGL_0404	Competence protein.	Competence protein ComEC.	0.865
LCGL_0137	LCGL_0798	Competence protein.	Competence protein ComFC.	0.603
LCGL_0137	LCGL_0799	Competence protein.	Competence protein ComFA.	0.823
LCGL_0137	LCGL_1069	Competence protein.	DNA processing protein.	0.573
LCGL_0137	LCGL_1900	Competence protein.	Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	0.531
LCGL_0265	LCGL_0136	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	Competence protein.	0.686
LCGL_0265	LCGL_0137	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	Competence protein.	0.531
LCGL_0265	LCGL_0402	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	Competence protein ComEA.	0.494
LCGL_0265	LCGL_0404	Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.	Competence protein ComEC.	0.435