Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LCGL_0842Putative cell surface protein. (206 aa)    
Predicted Functional Partners:
LCGL_0843
Conserved hypothetical protein.
  
  
 0.774
LCGL_0844
Hypothetical protein.
     
 0.740
LCGL_0404
Competence protein ComEC.
  
  
 0.706
LCGL_0845
Putative cell surface protein.
     
0.614
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.475
LCGL_0643
Conserved hypothetical protein.
  
  
 0.467
LCGL_0437
Sugar transferase EpsD.
  
  
 0.465
LCGL_0841
Alpha-acetolactate decarboxylase.
       0.445
LCGL_0846
Hypothetical protein.
       0.416
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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