Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0870Spermidine/putrescine ABC transporter permease component. (264 aa)    
Predicted Functional Partners:
potA
Spermidine/putrescine ABC transporter ATP-binding component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.999
LCGL_0871
Spermidine/putrescine ABC transporter permease component.
0.999
LCGL_0872
Spermidine/putrescine ABC transporter substrate-binding component.
 
 
 0.999
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
  
  
 0.808
ecfA
ABC transporter ATP-binding component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
  
 0.532
LCGL_1702
Conserved hypothetical protein.
  
  
 0.496
folE
GTP cyclohydrolase I.
  
  
 0.490
LCGL_0404
Competence protein ComEC.
     
 0.401
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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