Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_0888Transcription regulator. (283 aa)    
Predicted Functional Partners:
LCGL_0735
Transcription regulator.
  
     0.774
LCGL_1722
Transcription regulator.
  
     0.773
LCGL_0621
Putative transcription regulator.
  
     0.771
LCGL_0288
Transcription regulator.
  
     0.754
LCGL_0489
Transcription regulator.
  
     0.748
LCGL_0815
Transcriptional regulator.
  
     0.745
murQ
Glucokinase regulator protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.557
LCGL_0887
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
    0.554
LCGL_0889
ABC transporter ATP-binding component.
       0.517
LCGL_0886
Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.
 
     0.500
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.