Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_0896Cellobiose-specific PTS system IIC component. (493 aa)    
Predicted Functional Partners:
LCGL_0294
Cellobiose PTS system IIA component.
 
 
 0.995
LCGL_0894
Cellobiose-specific PTS system IIB component.
 
 
 0.994
LCGL_0289
Cellobiose PTS system IIB component.
 
 
 0.988
LCGL_0293
Cellobiose PTS system IIB component.
 
 
 0.988
LCGL_0895
Conserved hypothetical protein.
 
  
 0.953
LCGL_0290
Cellobiose PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.926
LCGL_0725
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.923
LCGL_0950
Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.923
LCGL_0064
Phosphocarrier protein Hpr.
    
  0.902
LCGL_1666
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.837
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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