Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCGL_1027 | LCGL_1029 | LCGL_1027 | LCGL_1029 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.800 |
LCGL_1027 | LCGL_1030 | LCGL_1027 | LCGL_1030 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.814 |
LCGL_1027 | LCGL_1031 | LCGL_1027 | LCGL_1031 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
LCGL_1027 | LCGL_1032 | LCGL_1027 | LCGL_1032 | Conserved hypothetical protein. | tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.467 |
LCGL_1027 | LCGL_1033 | LCGL_1027 | LCGL_1033 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.402 |
LCGL_1027 | LCGL_1035 | LCGL_1027 | LCGL_1035 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.789 |
LCGL_1027 | nth | LCGL_1027 | LCGL_1028 | Conserved hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.922 |
LCGL_1029 | LCGL_1027 | LCGL_1029 | LCGL_1027 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.800 |
LCGL_1029 | LCGL_1030 | LCGL_1029 | LCGL_1030 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.967 |
LCGL_1029 | LCGL_1031 | LCGL_1029 | LCGL_1031 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.445 |
LCGL_1029 | LCGL_1032 | LCGL_1029 | LCGL_1032 | Conserved hypothetical protein. | tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.445 |
LCGL_1029 | LCGL_1033 | LCGL_1029 | LCGL_1033 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.402 |
LCGL_1029 | nth | LCGL_1029 | LCGL_1028 | Conserved hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.792 |
LCGL_1030 | LCGL_1027 | LCGL_1030 | LCGL_1027 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.814 |
LCGL_1030 | LCGL_1029 | LCGL_1030 | LCGL_1029 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.967 |
LCGL_1030 | LCGL_1031 | LCGL_1030 | LCGL_1031 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.449 |
LCGL_1030 | LCGL_1032 | LCGL_1030 | LCGL_1032 | Conserved hypothetical protein. | tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.445 |
LCGL_1030 | LCGL_1033 | LCGL_1030 | LCGL_1033 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.402 |
LCGL_1030 | nth | LCGL_1030 | LCGL_1028 | Conserved hypothetical protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.792 |
LCGL_1031 | LCGL_1027 | LCGL_1031 | LCGL_1027 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
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