Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_1253Exopolysaccharide biosynthesis protein EpsL. (296 aa)    
Predicted Functional Partners:
LCGL_1255
Teichoic acid biosynthesis protein F.
     
 0.839
LCGL_1252
Conserved hypothetical protein.
 
     0.837
LCGL_1254
Teichoic acid biosynthesis protein B.
 
   
 0.831
LCGL_1118
Hypothetical phage protein.
 
    0.803
LCGL_1140
Hypothetical phage protein.
  
     0.770
LCGL_0924
Conserved hypothetical protein.
  
     0.762
LCGL_0702
Conserved hypothetical protein.
  
     0.758
LCGL_0013
Conserved hypothetical protein.
  
     0.719
LCGL_1256
Conserved hypothetical protein.
       0.714
LCGL_1257
Glycerol-3-phosphate cytidyltransferase.
       0.714
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.