Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_1276Gluconate transporter protein. (450 aa)    
Predicted Functional Partners:
LCGL_1277
Gluconate kinase; Belongs to the FGGY kinase family.
 
  
 0.949
LCGL_1278
6-phosphogluconate dehydrogenase.
  
  
 0.892
LCGL_0594
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.688
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.624
LCGL_0426
Fructose-specific PTS system enzyme IIABC components.
     
 0.517
LCGL_0590
Truncated fructose-specific PTS system IIABC components.
     
 0.517
LCGL_0591
Truncated fructose-specific PTS system IIABC components.
     
 0.517
LCGL_1534
Decarboxylating 6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.497
LCGL_1279
Glucan 1,6-alpha-glucosidase.
  
    0.450
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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