Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LCGL_1279Glucan 1,6-alpha-glucosidase. (542 aa)    
Predicted Functional Partners:
LCGL_1280
Hypothetical protein.
       0.651
LCGL_0578
Sucrose-specific PTS system IIBC components.
  
  
 0.556
LCGL_1046
N-acetylglucosamine-specific PTS system IIABC components.
  
  
 0.556
LCGL_1667
Beta-glucoside-specific PTS system IIABC components.
  
  
 0.556
LCGL_0517
Maltose ABC transporter substrate-binding component.
  
  
 0.520
LCGL_1473
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.491
LCGL_1278
6-phosphogluconate dehydrogenase.
  
    0.485
LCGL_1277
Gluconate kinase; Belongs to the FGGY kinase family.
     
 0.475
LCGL_0516
Maltose ABC transporter permease component.
 
  
 0.471
LCGL_1276
Gluconate transporter protein.
  
    0.450
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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