Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LCGL_1433Arsenical resistance operon repressor. (108 aa)    
Predicted Functional Partners:
LCGL_1432
Arsenical resistance operon trans-acting repressor.
 
   
 0.911
LCGL_1431
Arsenical pump-driving ATPase.
 
   
 0.901
LCGL_0559
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.850
LCGL_0566
Transcription regulator.
 
  
 0.745
LCGL_1429
Arsenical-resistance protein.
  
  
 0.703
LCGL_1430
Putative dehydrogenase.
     
 0.694
LCGL_1428
Conserved hypothetical protein.
       0.620
LCGL_1427
Hypothetical protein.
       0.504
LCGL_0303
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.445
LCGL_1235
Transcription repressor protein.
  
  
 0.442
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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