Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_1467Cytochrome D ABC transporter ATP-binding and permease components. (572 aa)    
Predicted Functional Partners:
LCGL_1468
Cytochrome D ABC transporter ATP-binding and permease components.
 
0.999
LCGL_1469
Cytochrome D ubiquinol oxidase subunit II.
 
  
 0.976
LCGL_1470
Truncated cytochrome D ubiquinol oxidase subunit I.
 
  
 0.934
LCGL_1471
Truncated cytochrome D ubiquinol oxidase subunit I.
 
  
 0.877
pstB
Phosphate ABC transporter ATP-binding component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.824
LCGL_0097
Prenyltransferase.
 
   
 0.768
LCGL_0096
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.716
LCGL_0820
Prenyltransferase.
 
   
 0.661
LCGL_0716
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.652
LCGL_1355
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
  
     0.605
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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