Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LCGL_1502 | LCGL_1503 | LCGL_1502 | LCGL_1503 | Conserved hypothetical protein. | Aspartate aminotransferase. | 0.782 |
LCGL_1502 | LCGL_1504 | LCGL_1502 | LCGL_1504 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.782 |
LCGL_1502 | asnS | LCGL_1502 | LCGL_1501 | Conserved hypothetical protein. | asparaginyl-tRNA synthetase. | 0.575 |
LCGL_1502 | dinG | LCGL_1502 | LCGL_1505 | Conserved hypothetical protein. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.463 |
LCGL_1503 | LCGL_1502 | LCGL_1503 | LCGL_1502 | Aspartate aminotransferase. | Conserved hypothetical protein. | 0.782 |
LCGL_1503 | LCGL_1504 | LCGL_1503 | LCGL_1504 | Aspartate aminotransferase. | Conserved hypothetical protein. | 0.842 |
LCGL_1503 | asnS | LCGL_1503 | LCGL_1501 | Aspartate aminotransferase. | asparaginyl-tRNA synthetase. | 0.659 |
LCGL_1503 | dinG | LCGL_1503 | LCGL_1505 | Aspartate aminotransferase. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.567 |
LCGL_1504 | LCGL_1502 | LCGL_1504 | LCGL_1502 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.782 |
LCGL_1504 | LCGL_1503 | LCGL_1504 | LCGL_1503 | Conserved hypothetical protein. | Aspartate aminotransferase. | 0.842 |
LCGL_1504 | asnS | LCGL_1504 | LCGL_1501 | Conserved hypothetical protein. | asparaginyl-tRNA synthetase. | 0.617 |
LCGL_1504 | dinG | LCGL_1504 | LCGL_1505 | Conserved hypothetical protein. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.712 |
asnS | LCGL_1502 | LCGL_1501 | LCGL_1502 | asparaginyl-tRNA synthetase. | Conserved hypothetical protein. | 0.575 |
asnS | LCGL_1503 | LCGL_1501 | LCGL_1503 | asparaginyl-tRNA synthetase. | Aspartate aminotransferase. | 0.659 |
asnS | LCGL_1504 | LCGL_1501 | LCGL_1504 | asparaginyl-tRNA synthetase. | Conserved hypothetical protein. | 0.617 |
asnS | dinG | LCGL_1501 | LCGL_1505 | asparaginyl-tRNA synthetase. | ATP-dependent DNA helicase; 3'-5' exonuclease. | 0.660 |
dinG | LCGL_1502 | LCGL_1505 | LCGL_1502 | ATP-dependent DNA helicase; 3'-5' exonuclease. | Conserved hypothetical protein. | 0.463 |
dinG | LCGL_1503 | LCGL_1505 | LCGL_1503 | ATP-dependent DNA helicase; 3'-5' exonuclease. | Aspartate aminotransferase. | 0.567 |
dinG | LCGL_1504 | LCGL_1505 | LCGL_1504 | ATP-dependent DNA helicase; 3'-5' exonuclease. | Conserved hypothetical protein. | 0.712 |
dinG | asnS | LCGL_1505 | LCGL_1501 | ATP-dependent DNA helicase; 3'-5' exonuclease. | asparaginyl-tRNA synthetase. | 0.660 |