Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LCGL_1668Beta-glucoside operon antiterminator. (279 aa)    
Predicted Functional Partners:
LCGL_1667
Beta-glucoside-specific PTS system IIABC components.
 
 0.973
LCGL_0578
Sucrose-specific PTS system IIBC components.
 
 
 0.888
LCGL_1194
Beta-glucoside-specific PTS system IIABC components.
 
 0.870
LCGL_0622
Maltose and glucose-specific PTS system IIABC components.
 
 
 0.817
LCGL_1046
N-acetylglucosamine-specific PTS system IIABC components.
 
 
 0.803
LCGL_1195
Conserved hypothetical protein.
 
 
 
 0.742
LCGL_1666
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.710
LCGL_1665
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.706
LCGL_0294
Cellobiose PTS system IIA component.
  
  
 0.633
LCGL_0065
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 
 
 0.558
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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