Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LCGL_1709CDP-diacylglycerol-phosphate phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (183 aa)    
Predicted Functional Partners:
LCGL_1710
Conserved hypothetical protein.
  
    0.975
LCGL_1853
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
 
 0.964
LCGL_1711
Peptidase.
  
  
 0.690
LCGL_1712
Protease.
  
  
 0.690
LCGL_1931
Cell shape determining protein MreD.
  
  
 0.665
recF
Recombination protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
  
 0.648
rsmG
Glucose inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.612
folD
Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.608
LCGL_1932
Cell shape determining protein MreC; Involved in formation and maintenance of cell shape.
     
 0.590
LCGL_1713
Conserved hypothetical protein.
       0.577
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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