STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_1896Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
LCGL_1895
Transcription regulator.
       0.674
LCGL_0511
Conserved hypothetical protein.
  
     0.618
LCGL_0892
Conserved hypothetical protein.
  
     0.572
LCGL_0923
Conserved hypothetical protein.
  
     0.548
recX
Conserved hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
       0.542
LCGL_0998
Conserved hypothetical protein.
  
     0.540
LCGL_1933
Conserved hypothetical protein.
  
     0.492
LCGL_0779
Conserved hypothetical protein.
 
     0.470
LCGL_0778
Conserved hypothetical protein; Belongs to the UPF0374 family.
 
     0.446
LCGL_1209
Glycerophosphodiester phosphodiesterase.
  
     0.412
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.