STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCGL_1904Conserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
dnaX
DNA polymerase III gamma/tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.762
LCGL_1905
Conserved hypothetical protein.
       0.762
LCGL_1906
Conserved hypothetical protein.
       0.591
LCGL_1907
Conserved hypothetical protein.
       0.591
LCGL_1527
Conserved hypothetical protein.
  
     0.582
LCGL_0640
Acetyltransferase.
 
 
   0.565
LCGL_0054
Putative acetyltransferase.
 
 
   0.535
LCGL_1528
Conserved hypothetical protein.
  
     0.530
LCGL_0470
Acetyltransferase.
 
 
 
 0.520
LCGL_1908
Chorismate mutase.
     
 0.472
Your Current Organism:
Lactococcus garvieae
NCBI taxonomy Id: 420890
Other names: L. garvieae Lg2, Lactococcus garvieae Lg2, Lactococcus garvieae str. Lg2, Lactococcus garvieae strain Lg2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.