STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhnFTranscriptional regulator, GntR family. (252 aa)    
Predicted Functional Partners:
PhnG
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG.
 
  
 0.989
SFH97995.1
alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.986
phnN
Ribose 1,5-bisphosphokinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.968
PhnH
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
  
 0.965
SFH97979.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
  
 0.965
PhnL
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
  
 0.961
PhnK
Putative phosphonate transport system ATP-binding protein.
 
  
 0.959
SFH97908.1
Putative phosphonate metabolism protein.
 
     0.948
SFH98058.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
  
 0.948
PhnD
Phosphonate transport system substrate-binding protein.
 
  
 0.937
Your Current Organism:
Paraburkholderia megapolitana
NCBI taxonomy Id: 420953
Other names: Burkholderia megapolitana, Burkholderia megapolitana Vandamme et al. 2007, CCUG 53006, LMG 23650, LMG:23650, P. megapolitana, Paraburkholderia megapolitana (Vandamme et al. 2007) Sawana et al. 2015, strain A3
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