STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI23662.1NitT/TauT family transport system ATP-binding protein. (282 aa)    
Predicted Functional Partners:
SFI23642.1
NitT/TauT family transport system permease protein.
  
 0.966
SFI23684.1
NitT/TauT family transport system substrate-binding protein.
 
  
 0.907
SFI23620.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 0.876
SFH87076.1
Sulfonate transport system permease protein.
 
  
 0.843
SFH87063.1
Sulfonate transport system permease protein.
  
 0.841
SFI15792.1
Taurine transport system permease protein.
 
  
 0.834
SFJ44123.1
Sulfonate transport system permease protein.
  
 0.822
SFH81898.1
NitT/TauT family transport system permease protein.
 
  
 0.819
SFK02730.1
NitT/TauT family transport system permease protein.
 
  
 0.813
SFK02749.1
NitT/TauT family transport system permease protein.
 
  
 0.780
Your Current Organism:
Paraburkholderia megapolitana
NCBI taxonomy Id: 420953
Other names: Burkholderia megapolitana, Burkholderia megapolitana Vandamme et al. 2007, CCUG 53006, LMG 23650, LMG:23650, P. megapolitana, Paraburkholderia megapolitana (Vandamme et al. 2007) Sawana et al. 2015, strain A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.