Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFJ31147.1Right handed beta helix region. (717 aa)    
Predicted Functional Partners:
SFJ34980.1
Tat (twin-arginine translocation) pathway signal sequence.
 
 
 
 0.752
SFJ11376.1
Cytochrome P450.
  
     0.738
SFI48004.1
alpha-L-fucosidase 2.
  
   
 0.674
SFI74933.1
Phosphotransferase enzyme family protein.
  
     0.661
SFJ33459.1
Carbohydrate binding module (family 6).
 
   
 0.656
SFI80586.1
Alpha-galactosidase.
  
   
 0.628
SFI48030.1
Alpha-galactosidase.
  
   
 0.618
SFI99003.1
Alpha-galactosidase.
  
   
 0.618
SFI89190.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
 
 
 0.580
SFI73860.1
GDSL-like Lipase/Acylhydrolase family protein.
 
 
 
 0.561
Your Current Organism:
Paraburkholderia megapolitana
NCBI taxonomy Id: 420953
Other names: Burkholderia megapolitana, Burkholderia megapolitana Vandamme et al. 2007, CCUG 53006, LMG 23650, LMG:23650, P. megapolitana, Paraburkholderia megapolitana (Vandamme et al. 2007) Sawana et al. 2015, strain A3
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