STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ48023.1Lipid-binding SYLF domain-containing protein. (195 aa)    
Predicted Functional Partners:
SFI73490.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
    0.558
SFJ81822.1
Protein of unknown function.
  
    0.484
SFJ48354.1
Polysaccharide export outer membrane protein.
  
    0.420
SFJ43318.1
Polysaccharide export outer membrane protein.
  
    0.409
SFH87748.1
Polysaccharide export outer membrane protein.
  
    0.403
Your Current Organism:
Paraburkholderia megapolitana
NCBI taxonomy Id: 420953
Other names: Burkholderia megapolitana, Burkholderia megapolitana Vandamme et al. 2007, CCUG 53006, LMG 23650, LMG:23650, P. megapolitana, Paraburkholderia megapolitana (Vandamme et al. 2007) Sawana et al. 2015, strain A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.