STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ78490.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
SFJ78770.1
Hypothetical protein.
 
 
 0.997
SFJ78618.1
Hypothetical protein.
 
 
 0.995
SFJ78513.1
P2-like prophage tail protein X.
 
  
 0.993
SFJ78538.1
Hypothetical protein.
 
  
 0.993
SFJ78601.1
Hypothetical protein.
 
  
 0.987
SFJ78724.1
Phage tail protein, P2 protein I family.
 
  
 0.987
SFJ78749.1
Phage-related baseplate assembly protein.
 
  
 0.987
SFJ78580.1
Phage tail assembly chaperone protein, E, or 41 or 14.
 
    0.985
SFJ78845.1
Phage baseplate assembly protein V.
 
  
 0.985
SFJ78559.1
Phage-related minor tail protein.
 
  
 0.935
Your Current Organism:
Paraburkholderia megapolitana
NCBI taxonomy Id: 420953
Other names: Burkholderia megapolitana, Burkholderia megapolitana Vandamme et al. 2007, CCUG 53006, LMG 23650, LMG:23650, P. megapolitana, Paraburkholderia megapolitana (Vandamme et al. 2007) Sawana et al. 2015, strain A3
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