STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ48806.1Acyl-CoA dehydrogenase, short-chain specific. (412 aa)    
Predicted Functional Partners:
CTQ48807.1
Putative aminoglycoside phosphotransferase.
 0.992
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.975
fadB
Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.958
etfA
Electron transfer flavoprotein large subunit.
 0.918
etfB
Electron transfer flavoprotein small subunit.
 
 
 0.898
fadA_1
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.852
echA8_4
Putative enoyl-CoA hydratase echA8.
   
  0.829
phbA_1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.822
phbA_2
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.822
CTQ49614.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 
  0.775
Your Current Organism:
Jannaschia donghaensis
NCBI taxonomy Id: 420998
Other names: J. donghaensis, JCM 14563, Jannaschia donghaensis Yoon et al. 2007, KCTC 12862, strain DSW-17
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