Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ48598.1 | CTQ49037.1 | JDO7802_00602 | JDO7802_01046 | Hypothetical protein. | Putative membrane protein. | 0.773 |
CTQ48598.1 | CTQ49038.1 | JDO7802_00602 | JDO7802_01047 | Hypothetical protein. | Hypothetical protein; N-terminal double-transmembrane domain. | 0.774 |
CTQ48598.1 | CTQ49387.1 | JDO7802_00602 | JDO7802_01400 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.481 |
CTQ49037.1 | CTQ48598.1 | JDO7802_01046 | JDO7802_00602 | Putative membrane protein. | Hypothetical protein. | 0.773 |
CTQ49037.1 | CTQ49038.1 | JDO7802_01046 | JDO7802_01047 | Putative membrane protein. | Hypothetical protein; N-terminal double-transmembrane domain. | 0.970 |
CTQ49037.1 | CTQ49387.1 | JDO7802_01046 | JDO7802_01400 | Putative membrane protein. | L,D-transpeptidase catalytic domain. | 0.479 |
CTQ49038.1 | CTQ48598.1 | JDO7802_01047 | JDO7802_00602 | Hypothetical protein; N-terminal double-transmembrane domain. | Hypothetical protein. | 0.774 |
CTQ49038.1 | CTQ49037.1 | JDO7802_01047 | JDO7802_01046 | Hypothetical protein; N-terminal double-transmembrane domain. | Putative membrane protein. | 0.970 |
CTQ49038.1 | CTQ49387.1 | JDO7802_01047 | JDO7802_01400 | Hypothetical protein; N-terminal double-transmembrane domain. | L,D-transpeptidase catalytic domain. | 0.417 |
CTQ49387.1 | CTQ48598.1 | JDO7802_01400 | JDO7802_00602 | L,D-transpeptidase catalytic domain. | Hypothetical protein. | 0.481 |
CTQ49387.1 | CTQ49037.1 | JDO7802_01400 | JDO7802_01046 | L,D-transpeptidase catalytic domain. | Putative membrane protein. | 0.479 |
CTQ49387.1 | CTQ49038.1 | JDO7802_01400 | JDO7802_01047 | L,D-transpeptidase catalytic domain. | Hypothetical protein; N-terminal double-transmembrane domain. | 0.417 |
CTQ49387.1 | atpI | JDO7802_01400 | JDO7802_00278 | L,D-transpeptidase catalytic domain. | ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex. | 0.411 |
CTQ49387.1 | ribA | JDO7802_01400 | JDO7802_01399 | L,D-transpeptidase catalytic domain. | GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.861 |
CTQ49387.1 | yycF | JDO7802_01400 | JDO7802_01398 | L,D-transpeptidase catalytic domain. | Transcriptional regulatory protein YycF. | 0.621 |
atpI | CTQ49387.1 | JDO7802_00278 | JDO7802_01400 | ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex. | L,D-transpeptidase catalytic domain. | 0.411 |
ribA | CTQ49387.1 | JDO7802_01399 | JDO7802_01400 | GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | L,D-transpeptidase catalytic domain. | 0.861 |
ribA | yycF | JDO7802_01399 | JDO7802_01398 | GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | Transcriptional regulatory protein YycF. | 0.579 |
yycF | CTQ49387.1 | JDO7802_01398 | JDO7802_01400 | Transcriptional regulatory protein YycF. | L,D-transpeptidase catalytic domain. | 0.621 |
yycF | ribA | JDO7802_01398 | JDO7802_01399 | Transcriptional regulatory protein YycF. | GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. | 0.579 |