Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ49785.1 | dsbD | JDO7802_01802 | JDO7802_01762 | Hypothetical protein. | Thiol:disulfide interchange protein DsbD precursor. | 0.891 |
CTQ49785.1 | dsbE | JDO7802_01802 | JDO7802_02330 | Hypothetical protein. | Cytochrome c biogenesis protein CcmG. | 0.961 |
CTQ49785.1 | msrB_1 | JDO7802_01802 | JDO7802_00341 | Hypothetical protein. | Peptide methionine sulfoxide reductase MsrB. | 0.492 |
CTQ49785.1 | msrB_2 | JDO7802_01802 | JDO7802_01909 | Hypothetical protein. | Peptide methionine sulfoxide reductase MsrB. | 0.492 |
CTQ49785.1 | msrB_3 | JDO7802_01802 | JDO7802_02323 | Hypothetical protein. | Peptide methionine sulfoxide reductase MsrB. | 0.492 |
CTQ49785.1 | tlpA | JDO7802_01802 | JDO7802_01902 | Hypothetical protein. | Cytochrome c biogenesis protein TlpA. | 0.961 |
CTQ50841.1 | dsbD | JDO7802_02872 | JDO7802_01762 | Hypothetical protein. | Thiol:disulfide interchange protein DsbD precursor. | 0.879 |
dsbA | dsbD | JDO7802_01761 | JDO7802_01762 | Thiol:disulfide interchange protein DsbA precursor. | Thiol:disulfide interchange protein DsbD precursor. | 0.963 |
dsbA | dsbE | JDO7802_01761 | JDO7802_02330 | Thiol:disulfide interchange protein DsbA precursor. | Cytochrome c biogenesis protein CcmG. | 0.425 |
dsbD | CTQ49785.1 | JDO7802_01762 | JDO7802_01802 | Thiol:disulfide interchange protein DsbD precursor. | Hypothetical protein. | 0.891 |
dsbD | CTQ50841.1 | JDO7802_01762 | JDO7802_02872 | Thiol:disulfide interchange protein DsbD precursor. | Hypothetical protein. | 0.879 |
dsbD | dsbA | JDO7802_01762 | JDO7802_01761 | Thiol:disulfide interchange protein DsbD precursor. | Thiol:disulfide interchange protein DsbA precursor. | 0.963 |
dsbD | dsbE | JDO7802_01762 | JDO7802_02330 | Thiol:disulfide interchange protein DsbD precursor. | Cytochrome c biogenesis protein CcmG. | 0.964 |
dsbD | msrA_1 | JDO7802_01762 | JDO7802_01415 | Thiol:disulfide interchange protein DsbD precursor. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.891 |
dsbD | msrA_2 | JDO7802_01762 | JDO7802_01959 | Thiol:disulfide interchange protein DsbD precursor. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.891 |
dsbD | msrB_1 | JDO7802_01762 | JDO7802_00341 | Thiol:disulfide interchange protein DsbD precursor. | Peptide methionine sulfoxide reductase MsrB. | 0.898 |
dsbD | msrB_2 | JDO7802_01762 | JDO7802_01909 | Thiol:disulfide interchange protein DsbD precursor. | Peptide methionine sulfoxide reductase MsrB. | 0.898 |
dsbD | msrB_3 | JDO7802_01762 | JDO7802_02323 | Thiol:disulfide interchange protein DsbD precursor. | Peptide methionine sulfoxide reductase MsrB. | 0.898 |
dsbD | tlpA | JDO7802_01762 | JDO7802_01902 | Thiol:disulfide interchange protein DsbD precursor. | Cytochrome c biogenesis protein TlpA. | 0.960 |
dsbE | CTQ49785.1 | JDO7802_02330 | JDO7802_01802 | Cytochrome c biogenesis protein CcmG. | Hypothetical protein. | 0.961 |
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