STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrA_2Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (216 aa)    
Predicted Functional Partners:
msrB_3
Peptide methionine sulfoxide reductase MsrB.
 
 0.988
msrB_2
Peptide methionine sulfoxide reductase MsrB.
 
 0.986
tlpA
Cytochrome c biogenesis protein TlpA.
   
 0.961
dsbE
Cytochrome c biogenesis protein CcmG.
   
 0.961
dsbD
Thiol:disulfide interchange protein DsbD precursor.
   
 
 0.891
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.888
msrB_1
Peptide methionine sulfoxide reductase MsrB.
 
 
 0.764
CTQ49943.1
Major Facilitator Superfamily protein.
       0.729
CTQ49941.1
Hypothetical protein.
       0.541
CTQ48550.1
Glutaredoxin-family domain protein.
   
 
 0.503
Your Current Organism:
Jannaschia donghaensis
NCBI taxonomy Id: 420998
Other names: J. donghaensis, JCM 14563, Jannaschia donghaensis Yoon et al. 2007, KCTC 12862, strain DSW-17
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.