Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ49293.1 | CTQ50263.1 | JDO7802_01306 | JDO7802_02283 | Putative MscS family protein.1 precursor. | Inner membrane protein. | 0.571 |
CTQ50262.1 | CTQ50263.1 | JDO7802_02282 | JDO7802_02283 | Clan AA aspartic protease. | Inner membrane protein. | 0.824 |
CTQ50262.1 | ndk | JDO7802_02282 | JDO7802_02285 | Clan AA aspartic protease. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.592 |
CTQ50262.1 | yheS | JDO7802_02282 | JDO7802_02284 | Clan AA aspartic protease. | Putative ABC transporter ATP-binding protein YheS. | 0.624 |
CTQ50263.1 | CTQ49293.1 | JDO7802_02283 | JDO7802_01306 | Inner membrane protein. | Putative MscS family protein.1 precursor. | 0.571 |
CTQ50263.1 | CTQ50262.1 | JDO7802_02283 | JDO7802_02282 | Inner membrane protein. | Clan AA aspartic protease. | 0.824 |
CTQ50263.1 | gltB | JDO7802_02283 | JDO7802_01226 | Inner membrane protein. | Glutamate synthase [NADPH] large chain precursor. | 0.406 |
CTQ50263.1 | kefA_1 | JDO7802_02283 | JDO7802_02850 | Inner membrane protein. | Potassium efflux system KefA precursor. | 0.510 |
CTQ50263.1 | mscS_2 | JDO7802_02283 | JDO7802_02311 | Inner membrane protein. | Small-conductance mechanosensitive channel. | 0.493 |
CTQ50263.1 | ndk | JDO7802_02283 | JDO7802_02285 | Inner membrane protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.664 |
CTQ50263.1 | yheS | JDO7802_02283 | JDO7802_02284 | Inner membrane protein. | Putative ABC transporter ATP-binding protein YheS. | 0.703 |
gltB | CTQ50263.1 | JDO7802_01226 | JDO7802_02283 | Glutamate synthase [NADPH] large chain precursor. | Inner membrane protein. | 0.406 |
kefA_1 | CTQ50263.1 | JDO7802_02850 | JDO7802_02283 | Potassium efflux system KefA precursor. | Inner membrane protein. | 0.510 |
mscS_2 | CTQ50263.1 | JDO7802_02311 | JDO7802_02283 | Small-conductance mechanosensitive channel. | Inner membrane protein. | 0.493 |
ndk | CTQ50262.1 | JDO7802_02285 | JDO7802_02282 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Clan AA aspartic protease. | 0.592 |
ndk | CTQ50263.1 | JDO7802_02285 | JDO7802_02283 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Inner membrane protein. | 0.664 |
ndk | yheS | JDO7802_02285 | JDO7802_02284 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Putative ABC transporter ATP-binding protein YheS. | 0.585 |
yheS | CTQ50262.1 | JDO7802_02284 | JDO7802_02282 | Putative ABC transporter ATP-binding protein YheS. | Clan AA aspartic protease. | 0.624 |
yheS | CTQ50263.1 | JDO7802_02284 | JDO7802_02283 | Putative ABC transporter ATP-binding protein YheS. | Inner membrane protein. | 0.703 |
yheS | ndk | JDO7802_02284 | JDO7802_02285 | Putative ABC transporter ATP-binding protein YheS. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.585 |