Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ48588.1 | CTQ48686.1 | JDO7802_00591 | JDO7802_00690 | Putative FAD-linked oxidoreductase. | Soluble hydrogenase 42 kDa subunit. | 0.840 |
CTQ48588.1 | CTQ50379.1 | JDO7802_00591 | JDO7802_02402 | Putative FAD-linked oxidoreductase. | Ureidoglycolate lyase. | 0.723 |
CTQ48588.1 | ghrA | JDO7802_00591 | JDO7802_00694 | Putative FAD-linked oxidoreductase. | Glyoxylate/hydroxypyruvate reductase A. | 0.839 |
CTQ48588.1 | ghrB | JDO7802_00591 | JDO7802_02403 | Putative FAD-linked oxidoreductase. | Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.683 |
CTQ48588.1 | glcB | JDO7802_00591 | JDO7802_02423 | Putative FAD-linked oxidoreductase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.854 |
CTQ48686.1 | CTQ48588.1 | JDO7802_00690 | JDO7802_00591 | Soluble hydrogenase 42 kDa subunit. | Putative FAD-linked oxidoreductase. | 0.840 |
CTQ48686.1 | CTQ50379.1 | JDO7802_00690 | JDO7802_02402 | Soluble hydrogenase 42 kDa subunit. | Ureidoglycolate lyase. | 0.736 |
CTQ48686.1 | ghrA | JDO7802_00690 | JDO7802_00694 | Soluble hydrogenase 42 kDa subunit. | Glyoxylate/hydroxypyruvate reductase A. | 0.856 |
CTQ48686.1 | ghrB | JDO7802_00690 | JDO7802_02403 | Soluble hydrogenase 42 kDa subunit. | Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.741 |
CTQ48686.1 | glcB | JDO7802_00690 | JDO7802_02423 | Soluble hydrogenase 42 kDa subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.866 |
CTQ50377.1 | CTQ50379.1 | JDO7802_02400 | JDO7802_02402 | 2-keto-3-deoxy-L-fuconate dehydrogenase. | Ureidoglycolate lyase. | 0.734 |
CTQ50377.1 | ghrB | JDO7802_02400 | JDO7802_02403 | 2-keto-3-deoxy-L-fuconate dehydrogenase. | Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.623 |
CTQ50377.1 | mdlA | JDO7802_02400 | JDO7802_02404 | 2-keto-3-deoxy-L-fuconate dehydrogenase. | Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.657 |
CTQ50379.1 | CTQ48588.1 | JDO7802_02402 | JDO7802_00591 | Ureidoglycolate lyase. | Putative FAD-linked oxidoreductase. | 0.723 |
CTQ50379.1 | CTQ48686.1 | JDO7802_02402 | JDO7802_00690 | Ureidoglycolate lyase. | Soluble hydrogenase 42 kDa subunit. | 0.736 |
CTQ50379.1 | CTQ50377.1 | JDO7802_02402 | JDO7802_02400 | Ureidoglycolate lyase. | 2-keto-3-deoxy-L-fuconate dehydrogenase. | 0.734 |
CTQ50379.1 | fumC | JDO7802_02402 | JDO7802_02866 | Ureidoglycolate lyase. | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.684 |
CTQ50379.1 | ghrA | JDO7802_02402 | JDO7802_00694 | Ureidoglycolate lyase. | Glyoxylate/hydroxypyruvate reductase A. | 0.725 |
CTQ50379.1 | ghrB | JDO7802_02402 | JDO7802_02403 | Ureidoglycolate lyase. | Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.882 |
CTQ50379.1 | glcB | JDO7802_02402 | JDO7802_02423 | Ureidoglycolate lyase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.739 |
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