Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
algC | eda | JDO7802_02310 | JDO7802_02628 | Phosphomannomutase/phosphoglucomutase. | KHG/KDPG aldolase. | 0.840 |
algC | galM | JDO7802_02310 | JDO7802_00233 | Phosphomannomutase/phosphoglucomutase. | Aldose 1-epimerase. | 0.447 |
algC | glk | JDO7802_02310 | JDO7802_02696 | Phosphomannomutase/phosphoglucomutase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.887 |
algC | pgi | JDO7802_02310 | JDO7802_03022 | Phosphomannomutase/phosphoglucomutase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.882 |
algC | pgm | JDO7802_02310 | JDO7802_01508 | Phosphomannomutase/phosphoglucomutase. | Phosphoglucomutase. | 0.860 |
algC | tal | JDO7802_02310 | JDO7802_00174 | Phosphomannomutase/phosphoglucomutase. | Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.858 |
algC | tktA | JDO7802_02310 | JDO7802_02920 | Phosphomannomutase/phosphoglucomutase. | Transketolase 1; Belongs to the transketolase family. | 0.873 |
algC | zwf | JDO7802_02310 | JDO7802_03024 | Phosphomannomutase/phosphoglucomutase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.867 |
bglA | galM | JDO7802_02697 | JDO7802_00233 | Beta-glucosidase A. | Aldose 1-epimerase. | 0.640 |
bglA | glk | JDO7802_02697 | JDO7802_02696 | Beta-glucosidase A. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.919 |
bglA | pgi | JDO7802_02697 | JDO7802_03022 | Beta-glucosidase A. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.532 |
bglA | tal | JDO7802_02697 | JDO7802_00174 | Beta-glucosidase A. | Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.415 |
eda | algC | JDO7802_02628 | JDO7802_02310 | KHG/KDPG aldolase. | Phosphomannomutase/phosphoglucomutase. | 0.840 |
eda | edd | JDO7802_02628 | JDO7802_02627 | KHG/KDPG aldolase. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.997 |
eda | galM | JDO7802_02628 | JDO7802_00233 | KHG/KDPG aldolase. | Aldose 1-epimerase. | 0.425 |
eda | glk | JDO7802_02628 | JDO7802_02696 | KHG/KDPG aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.946 |
eda | pgi | JDO7802_02628 | JDO7802_03022 | KHG/KDPG aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.919 |
eda | pgm | JDO7802_02628 | JDO7802_01508 | KHG/KDPG aldolase. | Phosphoglucomutase. | 0.854 |
eda | tal | JDO7802_02628 | JDO7802_00174 | KHG/KDPG aldolase. | Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.483 |
eda | zwf | JDO7802_02628 | JDO7802_03024 | KHG/KDPG aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.916 |
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