STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ51194.1Putative ester cyclase. (348 aa)    
Predicted Functional Partners:
CTQ50797.1
Putative ester cyclase.
 
     0.864
CTQ50794.1
Methionine synthase.
 
     0.814
CTQ49489.1
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator.
 
     0.809
CTQ49486.1
Cupin domain protein.
 
     0.783
CTQ50795.1
Putative mannose-6-phosphate isomerase.
 
     0.783
CTQ50411.1
Maltose-binding periplasmic proteins/domains.
  
     0.771
lacF_4
Lactose transport system permease protein LacF.
  
     0.748
sugB_1
Trehalose transport system permease protein SugB.
  
     0.701
rbsR
Ribose operon repressor.
 
     0.698
hpsN_1
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.627
Your Current Organism:
Jannaschia donghaensis
NCBI taxonomy Id: 420998
Other names: J. donghaensis, JCM 14563, Jannaschia donghaensis Yoon et al. 2007, KCTC 12862, strain DSW-17
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