STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ51299.1Diadenosine tetraphosphatase. (286 aa)    
Predicted Functional Partners:
yycG
Sensor histidine kinase YycG.
  
 
 0.922
CTQ49474.1
Blue-light-activated protein.
  
  
 0.841
barA_2
Signal transduction histidine-protein kinase BarA.
  
 
 0.833
CTQ51271.1
Blue-light-activated protein.
   
 
 0.832
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.820
CTQ50351.1
Blue-light-activated protein.
  
 
 0.805
CTQ50193.1
Putative periplasmic ligand-binding sensor domain protein.
 
 
 0.780
rcsC
Sensor kinase protein RcsC.
    
 0.771
guaA_2
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.688
CTQ50488.1
Aerobic sulfatase maturase family protein.
    
 0.668
Your Current Organism:
Jannaschia donghaensis
NCBI taxonomy Id: 420998
Other names: J. donghaensis, JCM 14563, Jannaschia donghaensis Yoon et al. 2007, KCTC 12862, strain DSW-17
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